Skills › Software Development › Dev workflow & Git
python-project-structure
Python project organization, module architecture, and public API design. Use when setting up new projects, organizing modules, defining public interfaces with __all__, or planning directory layouts.
Tools: mypackage
The full skill
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name: python-project-structure
description: Python project organization, module architecture, and public API design. Use when setting up new projects, organizing modules, defining public interfaces with __all__, or planning directory layouts.
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# Python Project Structure & Module Architecture
Design well-organized Python projects with clear module boundaries, explicit public interfaces, and maintainable directory structures. Good organization makes code discoverable and changes predictable.
## When to Use This Skill
– Starting a new Python project from scratch
– Reorganizing an existing codebase for clarity
– Defining module public APIs with `__all__`
– Deciding between flat and nested directory structures
– Determining test file placement strategies
– Creating reusable library packages
## Core Concepts
### 1. Module Cohesion
Group related code that changes together. A module should have a single, clear purpose.
### 2. Explicit Interfaces
Define what's public with `__all__`. Everything not listed is an internal implementation detail.
### 3. Flat Hierarchies
Prefer shallow directory structures. Add depth only for genuine sub-domains.
### 4. Consistent Conventions
Apply naming and organization patterns uniformly across the project.
## Quick Start
“`
myproject/
├── src/
│ └── myproject/
│ ├── __init__.py
│ ├── services/
│ ├── models/
│ └── api/
├── tests/
├── pyproject.toml
└── README.md
“`
## Fundamental Patterns
### Pattern 1: One Concept Per File
Each file should focus on a single concept or closely related set of functions. Consider splitting when a file:
– Handles multiple unrelated responsibilities
– Grows beyond 300-500 lines (varies by complexity)
– Contains classes that change for different reasons
“`python
# Good: Focused files
# user_service.py – User business logic
# user_repository.py – User data access
# user_models.py – User data structures
# Avoid: Kitchen sink files
# user.py – Contains service, repository, models, utilities…
“`
### Pattern 2: Explicit Public APIs with `__all__`
Define the public interface for every module. Unlisted members are internal implementation details.
“`python
# mypackage/services/__init__.py
from .user_service import UserService
from .order_service import OrderService
from .exceptions import ServiceError, ValidationError
__all__ = [
"UserService",
"OrderService",
"ServiceError",
"ValidationError",
]
# Internal helpers remain private by omission
# from .internal_helpers import _validate_input # Not exported
“`
### Pattern 3: Flat Directory Structure
Prefer minimal nesting. Deep hierarchies make imports verbose and navigation difficult.
“`
# Preferred: Flat structure
project/
├── api/
│ ├── routes.py
│ └── middleware.py
├── services/
│ ├── user_service.py
│ └── order_service.py
├── models/
│ ├── user.py
│ └── order.py
└── utils/
└── validation.py
# Avoid: Deep nesting
project/core/internal/services/impl/user/
“`
Add sub-packages only when there's a genuine sub-domain requiring isolation.
### Pattern 4: Test File Organization
Choose one approach and apply it consistently throughout the project.
**Option A: Colocated Tests**
“`
src/
├── user_service.py
├── test_user_service.py
├── order_service.py
└── test_order_service.py
“`
Benefits: Tests live next to the code they verify. Easy to see coverage gaps.
**Option B: Parallel Test Directory**
“`
src/
├── services/
│ ├── user_service.py
│ └── order_service.py
tests/
├── services/
│ ├── test_user_service.py
│ └── test_order_service.py
“`
Benefits: Clean separation between production and test code. Standard for larger projects.
## Advanced Patterns
### Pattern 5: Package Initialization
Use `__init__.py` to provide a clean public interface for package consumers.
“`python
# mypackage/__init__.py
"""MyPackage – A library for doing useful things."""
from .core import MainClass, HelperClass
from .exceptions import PackageError, ConfigError
from .config import Settings
__all__ = [
"MainClass",
"HelperClass",
"PackageError",
"ConfigError",
"Settings",
]
__version__ = "1.0.0"
“`
Consumers can then import directly from the package:
“`python
from mypackage import MainClass, Settings
“`
### Pattern 6: Layered Architecture
Organize code by architectural layer for clear separation of concerns.
“`
myapp/
├── api/ # HTTP handlers, request/response
│ ├── routes/
│ └── middleware/
├── services/ # Business logic
├── repositories/ # Data access
├── models/ # Domain entities
├── schemas/ # API schemas (Pydantic)
└── config/ # Configuration
“`
Each layer should only depend on layers below it, never above.
### Pattern 7: Domain-Driven Structure
For complex applications, organize by business domain rather than technical layer.
“`
ecommerce/
├── users/
│ ├── models.py
│ ├── services.py
│ ├── repository.py
│ └── api.py
├── orders/
│ ├── models.py
│ ├── services.py
│ ├── repository.py
│ └── api.py
└── shared/
├── database.py
└── exceptions.py
“`
## File and Module Naming
### Conventions
– Use `snake_case` for all file and module names: `user_repository.py`
– Avoid abbreviations that obscure meaning: `user_repository.py` not `usr_repo.py`
– Match class names to file names: `UserService` in `user_service.py`
### Import Style
Use absolute imports for clarity and reliability:
“`python
# Preferred: Absolute imports
from myproject.services import UserService
from myproject.models import User
# Avoid: Relative imports
from ..services import UserService
from . import models
“`
Relative imports can break when modules are moved or reorganized.
## Best Practices Summary
1. **Keep files focused** – One concept per file, consider splitting at 300-500 lines (varies by complexity)
2. **Define `__all__` explicitly** – Make public interfaces clear
3. **Prefer flat structures** – Add depth only for genuine sub-domains
4. **Use absolute imports** – More reliable and clearer
5. **Be consistent** – Apply patterns uniformly across the project
6. **Match names to content** – File names should describe their purpose
7. **Separate concerns** – Keep layers distinct and dependencies flowing one direction
8. **Document your structure** – Include a README explaining the organization